Stem-loop rno-mir-207

Accession

MI0003479

Description

Rattus norvegicus rno-mir-207 precursor miRNA

Literature search

7 open access papers mention rno-mir-207
(15 sentences)

Sequence

15 reads, 3 reads per million, 14 experiments

aggcaggggugaggggcugcgggaggagcggggcggaggcugcggcuugcgCUUCUCCUGGCUCUCCUCCCUUUcuuu
.((.(((((.((((((...(((((((((((((((.(......).)))).)))))))))))...)))))))))))))..

Structure

-a  c     u      cug           -    g ag 
  gg agggg gagggg   cgggaggagcg gggc g  g
  || ||||| ||||||   ||||||||||| |||| |   
  uc UUUCC CUCCUC   GUCCUCUUCgc uucg c  c
uu  -     -      UCG           g    g gu 

Annotation confidence Not enough data

Genome context

chr5: 57028859-57028936 [+]

Mature rno-miR-207

• Accession: MIMAT0003115
• Description: Rattus norvegicus rno-miR-207 mature miRNA
• Sequence: 52 - CUUCUCCUGGCUCUCCUCCCUUU - 74
• Evidence: experimental ; SOLiD [2]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249


2. PubMed ID: 16274478
   Identification of clustered microRNAs using an ab initio prediction method
   Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, Tuschl T, van Nimwegen E, Zavolan M
   BMC Bioinformatics (2005) 6:267