Stem-loop rno-mir-361

Accession

MI0003481

Description

Rattus norvegicus rno-mir-361 precursor miRNA

Literature search

8 open access papers mention rno-mir-361
(13 sentences)

Sequence

111001 reads, 89 reads per million, 492 experiments

gaagcUUAUCAGAAUCUCCAGGGGUACuuauuauuugaaaaguCCCCCAGGUGUGAUUCUGAUUCGUuuc
(((((..(((((((((.((.((((.((((.((....)).)))).)))).))...)))))))))..)))))

Structure

     UU         --U  A    U    a  a 
gaagc  AUCAGAAUC   CC GGGG ACuu uu u
|||||  |||||||||   || |||| |||| ||  
cuuUG  UAGUCUUAG   GG CCCC ugaa ag u
     CU         UGU  A    C    a  u 

Annotation confidence Medium

Genome context

chrX: 84708911-84708980 [-]

Mature rno-miR-361-5p

• Accession: MIMAT0003117
• Description: Rattus norvegicus rno-miR-361-5p mature miRNA
• Sequence: 6 - UUAUCAGAAUCUCCAGGGGUAC - 27
• Evidence: experimental ; SOLiD [2]

Mature rno-miR-361-3p

• Accession: MIMAT0017199
• Description: Rattus norvegicus rno-miR-361-3p mature miRNA
• Sequence: 44 - CCCCCAGGUGUGAUUCUGAUUCGU - 67
• Evidence: experimental ; SOLiD [2]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249


2. PubMed ID: 16274478
   Identification of clustered microRNAs using an ab initio prediction method
   Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, Tuschl T, van Nimwegen E, Zavolan M
   BMC Bioinformatics (2005) 6:267