Stem-loop hsa-mir-628

Accession

MI0003642

Symbol

HGNC: MIR628

Description

Homo sapiens hsa-mir-628 precursor miRNA mir-628

Gene
family

RF01012; mir-628

Literature search

32 open access papers mention hsa-mir-628
(80 sentences)

Sequence

8001 reads, 20 reads per million, 105 experiments

auagcuguugugucacuuccucAUGCUGACAUAUUUACUAGAGGguaaaauuaauaaccuUCUAGUAAGAGUGGCAGUCGAagggaagggcucau
........((.(((.((((((...((((.(((.(((((((((((((..........))))))))))))).))).))))....))))))))).)).

Structure

auagcugu  u   a      -cAU    A   A             aaaa 
        ug guc cuuccu    GCUG CAU UUUACUAGAGGgu    u
        || ||| ||||||    |||| ||| |||||||||||||     
        ac cgg gaaggg    UGAC GUG GAAUGAUCUucca    u
-------u  u   -      aAGC    G   A             auaa 

Annotation confidence Low

Comments

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].

Genome context

chr15: 55372940-55373034 [-]

Disease association

hsa-mir-628 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-628-5p

• Accession: MIMAT0004809
• Description: Homo sapiens hsa-miR-628-5p mature miRNA
• Sequence: 23 - AUGCUGACAUAUUUACUAGAGG - 44
• Evidence: experimental ; cloned [2]

Mature hsa-miR-628-3p

• Accession: MIMAT0003297
• Description: Homo sapiens hsa-miR-628-3p mature miRNA
• Sequence: 61 - UCUAGUAAGAGUGGCAGUCGA - 81
• Evidence: experimental ; Microarray [1], RT-PCR [1], SAGE [1], cloned [2]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692