miRBase entry: hsa-mir-1283-1

Stem-loop hsa-mir-1283-1


Accession
MI0003832
Symbol
HGNC: MIR1283-1
Description
Homo sapiens hsa-mir-1283-1 precursor miRNA mir-515
Gene
family?
RF00639; mir-515

Literature search
5 open access papers mention hsa-mir-1283-1
(7 sentences)

Sequence

109 reads, 979 reads per million, 25 experiments
cucaagcuaugagUCUACAAAGGAAAGCGCUUUCUguugucagaaagaagagaaagcgcuucccuuuugaggguuacgguuugagaa
((((((((.(((.(((..(((((.(((((((((((.((.(.....).)).))))))))))).)))))..))).))).))))))))..

Structure
--        a   g   AC     A           g  g c 
  cucaagcu uga UCU  AAAGG AAGCGCUUUCU uu u a
  |||||||| ||| |||  ||||| ||||||||||| || | g
  gaguuugg auu gga  uuucc uucgcgaaaga aa a a
aa        c   g   gu     c           g  g a 


Annotation confidence Not enough data
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Genome context
chr19: 53688481-53688567 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from hsa-mir-1283-1
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-1283-1 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-1283

Accession MIMAT0005799
Description Homo sapiens hsa-miR-1283 mature miRNA
Sequence 14 - UCUACAAAGGAAAGCGCUUUCU - 35
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 16954537
    Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
    "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
    "Genome Res (2006) 16:1289-1298

  2. PubMed ID: 18285502
    Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
    "Genome Res (2008) 18:610-621