Stem-loop mmu-mir-758

Accession

MI0004129

Symbol

MGI: Mir758

Description

Mus musculus mmu-mir-758 precursor miRNA mir-379

Gene
family

RF04292; mir-379

Literature search

4 open access papers mention mmu-mir-758
(10 sentences)

Sequence

2891 reads, 28 reads per million, 40 experiments

ugggugcgugaggUGGUUGACCAGAGAGCACACGcuauauuugugccgUUUGUGACCUGGUCCACUAacccucaguaucua
(((((((.(((((((((.((((((.(.(((.(((.(((....))).))).)))..))))))).))))..))))))))))))

Structure

       g     --    U      A -A   C   c   a 
ugggugc ugagg  UGGU GACCAG G  GCA ACG uau u
||||||| |||||  |||| |||||| |  ||| ||| |||  
aucuaug acucc  AUCA CUGGUC C  UGU Ugc gug u
       -     ca    C      - AG   U   c   u 

Annotation confidence High

Genome context

chr12: 109712810-109712890 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from mmu-mir-758

Mature mmu-miR-758-5p

• Accession: MIMAT0017235
• Description: Mus musculus mmu-miR-758-5p mature miRNA
• Sequence: 14 - UGGUUGACCAGAGAGCACACG - 34
• Evidence: experimental ; Illumina [4]

Mature mmu-miR-758-3p

• Accession: MIMAT0003889
• Description: Mus musculus mmu-miR-758-3p mature miRNA
• Sequence: 49 - UUUGUGACCUGGUCCACUA - 67
• Evidence: experimental ; cloned [1], 454 [2], Illumina [3-4]

References

1. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


2. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


3. PubMed ID: 16954537
   Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
   "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
   "Genome Res (2006) 16:1289-1298


4. PubMed ID: 17989215
   RNA sequence analysis defines Dicer's role in mouse embryonic stem cells
   "Calabrese JM, Seila AC, Yeo GW, Sharp PA"
   "Proc Natl Acad Sci U S A (2007) 104:18097-18102