Stem-loop mmu-mir-668

Accession

MI0004134

Symbol

MGI: Mir668

Description

Mus musculus mmu-mir-668 precursor miRNA mir-668

Gene
family

RF00890; mir-668

Literature search

6 open access papers mention mmu-mir-668
(31 sentences)

Sequence

11956 reads, 70 reads per million, 67 experiments

gGUAAGUGUGCCUCGGGUGAGCAUGcacuuaauguagguguaUGUCACUCGGCUCGGCCCACUACC
((((.(((.(((((((((((.((((((((((...))))))))))))))))))...))).)))))))

Structure

    A   U   ---        G          a 
gGUA GUG GCC   UCGGGUGA CAUGcacuua  
|||| ||| |||   |||||||| |||||||||| u
CCAU CAC CGG   GGCUCACU GUauguggau  
    -   C   CUC        -          g 

Annotation confidence High

Genome context

chr12: 109734732-109734797 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from mmu-mir-668

Mature mmu-miR-668-5p

• Accession: MIMAT0017237
• Description: Mus musculus mmu-miR-668-5p mature miRNA
• Sequence: 2 - GUAAGUGUGCCUCGGGUGAGCAUG - 25
• Evidence: experimental ; Illumina [4]

Mature mmu-miR-668-3p

• Accession: MIMAT0003732
• Description: Mus musculus mmu-miR-668-3p mature miRNA
• Sequence: 43 - UGUCACUCGGCUCGGCCCACUACC - 66
• Evidence: experimental ; MPSS [1], cloned [2], RAKE [2], Illumina [3]

References

1. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


2. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


3. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771


4. PubMed ID: 16954537
   Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
   "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
   "Genome Res (2006) 16:1289-1298