Stem-loop mmu-mir-682

Accession

MI0004644

Symbol

MGI: Mir682

Description

Mus musculus mmu-mir-682 precursor miRNA

Literature search

6 open access papers mention mmu-mir-682
(97 sentences)

Sequence

220 reads, 4.0 reads per million, 45 experiments

gccgucGGCAUCUGGCACUGUGGUuccugcaugaaaacaguggccggcggggccuggaccuacaacaccaccuCUGCAGUCACAGUGAAGUCUGcc
......((((.((..((((((((...(((((.((.......((((.....))))(((..........)))..))))))))))))))).))..))))

Structure

gccguc    -U  GG        Uuc     u  -----------aaacagu    g 
      GGCA  CU  CACUGUGG   cugca ga                  ggcc g
      ||||  ||  ||||||||   ||||| ||                  |||| c
      ccGU  GA  GUGACACU   GACGU Cu                  ccgg g
------    CU  -A        ---     -  ccaccacaacauccaggu    g 

Annotation confidence Medium

Genome context

13: 75793165-75793260 [+]

Mature mmu-miR-682-5p

• Accession: MIMAT0050682
• Description: Mus musculus mmu-miR-682-5p mature miRNA
• Sequence: 7 - GGCAUCUGGCACUGUGGU - 24
• Evidence: experimental ; MPSS [1], Illumina [2]

Mature mmu-miR-682-3p

• Accession: MIMAT0003459
• Description: Mus musculus mmu-miR-682-3p mature miRNA
• Sequence: 74 - CUGCAGUCACAGUGAAGUCUG - 94
• Evidence: experimental ; MPSS [1], Illumina [2]

References

1. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


2. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771