miRBase entry: mmu-mir-669b

Stem-loop mmu-mir-669b

Accession

MI0004666

Symbol

MGI: Mir669b

Description

Mus musculus mmu-mir-669b precursor miRNA

Literature search

14 open access papers mention mmu-mir-669b
(18 sentences)

Sequence

2816 reads, 29 reads per million, 91 experiments

augaauguaugugcauguguauauAGUUUUGUGUGCAUGUGCAUGUgugucuauuaauguaCAUAUACAUACACACAAACAUAUacacgcaugcgca
.........(((((((((((.((((..((((((((.(((((.((((((((......)))))))).))))).))))))))..)))).)))))))))))

Structure

augaaugua           a    GU        C     C        cu 
         ugugcaugugu uauA  UUUGUGUG AUGUG AUGUgugu  a
         ||||||||||| ||||  |||||||| ||||| ||||||||   
         acgcguacgca aUAU  AAACACAC UACAU UACaugua  u
---------           c    AC        A     A        au

Annotation confidence High

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Genome context

chr2: 10467790-10467886 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from mmu-mir-669b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mmu-miR-669b-5p

Accession	MIMAT0003476
Description	Mus musculus mmu-miR-669b-5p mature miRNA
Sequence	25 - AGUUUUGUGUGCAUGUGCAUGU - 46
Evidence	experimental MPSS [1], Illumina [2]
Database links
Predicted targets

Mature mmu-miR-669b-3p

Accession	MIMAT0017250
Description	Mus musculus mmu-miR-669b-3p mature miRNA
Sequence	62 - CAUAUACAUACACACAAACAUAU - 84
Evidence	experimental Illumina [2]
Database links
Predicted targets

References

PubMed ID: 20413612
Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
"Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
"Genes Dev (2010) 24:992-1009

PubMed ID: 16582102
The expression profile of microRNAs in mouse embryos
"Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
"Nucleic Acids Res (2006) 34:1765-1771