Stem-loop mmu-mir-669a-2

Accession

MI0004667

Symbol

MGI: Mir669a-2

Description

Mus musculus mmu-mir-669a-2 precursor miRNA

Literature search

15 open access papers mention mmu-mir-669a-2
(22 sentences)

Sequence

23876 reads, 319 reads per million, 101 experiments

cauguaugugcauguguguauAGUUGUGUGUGCAUGUUCAUGUCUauauuugaauauACAUAACAUACACACACACGUAUaaacgcaagcacacaca
..(((.(((((.(((((.((((..((((((((.(((((.((((.(((......))).))))))))).))))))))..)))).))))).))))).)))

Structure

ca   a     a     g    GU        C     C    C   au 
  ugu ugugc ugugu uauA  UGUGUGUG AUGUU AUGU Uau  u
  ||| ||||| ||||| ||||  |||||||| ||||| |||| |||   
  aca acacg acgca aUAU  ACACACAC UACAA UACA aua  u
--   c     a     a    GC        A     -    u   ag 

Annotation confidence High

Genome context

chr2: 10510164-10510260 [+]

Clustered miRNAs

23 other miRNAs are < 10 kb from mmu-mir-669a-2

Mature mmu-miR-669a-5p

• Accession: MIMAT0003477
• Description: Mus musculus mmu-miR-669a-5p mature miRNA
• Sequence: 22 - AGUUGUGUGUGCAUGUUCAUGUCU - 45
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-669a-3p

• Accession: MIMAT0017243
• Description: Mus musculus mmu-miR-669a-3p mature miRNA
• Sequence: 58 - ACAUAACAUACACACACACGUAU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


2. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


3. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771