Stem-loop xtr-mir-7-3

Accession

MI0004791

Description

Xenopus tropicalis xtr-mir-7-3 precursor miRNA

Sequence

309831 reads, 21002.0 reads per million, 4 experiments

cugggucgguuUGGAAGACUAGUGAUUUUGUUGuuuuuauaaaaguuugucacaaACAGCAAAUCGUAGUCUCCACucugccccagga
(((((.(((..((((.(((((.((((((.(((((((..((((....))))...))))))))))))))))))))))..))).)))))..

Structure

--     u   uu    A     G      U       -uu    a 
  cuggg cgg  UGGA GACUA UGAUUU GUUGuuu   auaa a
  ||||| |||  |||| ||||| |||||| |||||||   ||||  
  gaccc guc  ACCU CUGAU GCUAAA CGACAaa   uguu g
ag     c   uC    -     -      -       cac    u 

Annotation confidence High

Genome context

8: 133253546-133253633 [+]

Mature xtr-miR-7-5p

• Accession: MIMAT0003552
• Description: Xenopus tropicalis xtr-miR-7-5p mature miRNA
• Sequence: 12 - UGGAAGACUAGUGAUUUUGUUG - 33
• Evidence: experimental ; Northern [1]

Mature xtr-miR-7-3-3p

• Accession: MIMAT0052075
• Description: Xenopus tropicalis xtr-miR-7-3-3p mature miRNA
• Sequence: 56 - ACAGCAAAUCGUAGUCUCCAC - 76
• Evidence: experimental ; Northern [1]

References

1. PubMed ID: 18032731
   Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
   "Tang GQ, Maxwell ES"
   "Genome Res (2008) 18:104-112