Stem-loop xtr-mir-10a

Accession

MI0004796

Description

Xenopus tropicalis xtr-mir-10a precursor miRNA

Literature search

2 open access papers mention xtr-mir-10a
(5 sentences)

Sequence

55753 reads, 4368.0 reads per million, 4 experiments

gauuugccuguccucuguaugUACCCUGUAGAUCCGAAUUUGUGugagcgcaaucauaucaCAAAUUCGUGUCUGGGGGGAUaugcaguugacacaaacg
..((((..((((..((((((((.((((.(((((.(((((((((((((......)))...)))))))))).))))).))))))))))))..))))))))..

Structure

ga    cc    cu        A    G     C          ---   gc 
  uuug  uguc  cuguaugU CCCU UAGAU CGAAUUUGUG   uga  g
  ||||  ||||  |||||||| |||| ||||| ||||||||||   |||   
  aaac  acag  gacguaUA GGGG GUCUG GCUUAAACac   acu  c
gc    --    uu        -    G     U          uau   aa 

Annotation confidence High

Genome context

10: 12050568-12050667 [-]

Mature xtr-miR-10a-5p

• Accession: MIMAT0003557
• Description: Xenopus tropicalis xtr-miR-10a-5p mature miRNA
• Sequence: 22 - UACCCUGUAGAUCCGAAUUUGUG - 44
• Evidence: not_experimental

Mature xtr-miR-10a-3p

• Accession: MIMAT0052076
• Description: Xenopus tropicalis xtr-miR-10a-3p mature miRNA
• Sequence: 62 - CAAAUUCGUGUCUGGGGGGAU - 82
• Evidence: not_experimental

References