Stem-loop xtr-mir-10b

Accession

MI0004797

Description

Xenopus tropicalis xtr-mir-10b precursor miRNA

Literature search

2 open access papers mention xtr-mir-10b
(2 sentences)

Sequence

54507 reads, 4611.0 reads per million, 4 experiments

aacguugucuauaugUACCCUGUAGAACCGAAUUUGUgugguucguacagucaCAGAUUCGAUUCUAGGGGGAUauauggucgaugca
..(((((.((((((((.((((.(((((.((((((((((..((....))...)))))))))).))))).)))))))))))).)))))..

Structure

aa     u        A    G     C          -ug  u 
  cguug cuauaugU CCCU UAGAA CGAAUUUGUg   gu c
  ||||| |||||||| |||| ||||| ||||||||||   ||  
  guagc gguauaUA GGGG AUCUU GCUUAGACac   ca g
ac     u        -    G     A          uga  u 

Annotation confidence High

Genome context

9: 65082927-65083014 [+]

Mature xtr-miR-10b-5p

• Accession: MIMAT0003558
• Description: Xenopus tropicalis xtr-miR-10b-5p mature miRNA
• Sequence: 16 - UACCCUGUAGAACCGAAUUUGU - 37
• Evidence: not_experimental

Mature xtr-miR-10b-3p

• Accession: MIMAT0052077
• Description: Xenopus tropicalis xtr-miR-10b-3p mature miRNA
• Sequence: 54 - CAGAUUCGAUUCUAGGGGGAU - 74
• Evidence: not_experimental

References