Stem-loop xtr-mir-10c

Accession

MI0004798

Description

Xenopus tropicalis xtr-mir-10c precursor miRNA

Literature search

1 open access papers mention xtr-mir-10c
(17 sentences)

Sequence

26201 reads, 2018.0 reads per million, 4 experiments

uauaugcACCCUGUAGAAUCGAAUUUGUGUgaguucugaaccaCAGAUUCGUCUCUAGGGGGGUauauggg
(((((((.((((.((((..((((((((((............))))))))))..)))).)))))))))))..

Structure

--       A    G    AU          Ugagu 
  uauaugc CCCU UAGA  CGAAUUUGUG     u
  ||||||| |||| ||||  ||||||||||      
  guauaUG GGGG AUCU  GCUUAGACac     c
gg       -    G    CU          caagu 

Annotation confidence High

Genome context

2: 146020588-146020658 [-]

Mature xtr-miR-10c-5p

• Accession: MIMAT0003559
• Description: Xenopus tropicalis xtr-miR-10c-5p mature miRNA
• Sequence: 8 - ACCCUGUAGAAUCGAAUUUGUGU - 30
• Evidence: not_experimental

Mature xtr-miR-10c-3p

• Accession: MIMAT0052078
• Description: Xenopus tropicalis xtr-miR-10c-3p mature miRNA
• Sequence: 44 - CAGAUUCGUCUCUAGGGGGGU - 64
• Evidence: not_experimental

References