Accession
MI0004803
Description
Xenopus tropicalis
xtr-mir-17 precursor miRNA
Sequence
gucaagaguaauguCAAAGUGCUUACAGUGCAGGUAGUgauuuaacagaaccuACUGCAGUGAAGGCACUUGUagcauuauauugac
(((((..(((((((..((((((((.((.(((((.(((.(.(((....)))))))))))).)).))))))))...))))))).)))))
(((((..(((((((..((((((((.((.(((((.(((.(.(((....)))))))))))).)).))))))))...))))))).)))))
Structure
ga -CA A G G U a a
gucaa guaaugu AAGUGCUU CA UGCAG UAG g uuu a
||||| ||||||| |||||||| || ||||| ||| | |||
caguu uauuacg UUCACGGA GU ACGUC Auc c aag c
-a aUG A G - - - a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr2: 120020382-120020468 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from xtr-mir-17
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-miR-17-5p
| Accession | MIMAT0003564 |
| Description | Xenopus tropicalis xtr-miR-17-5p mature miRNA |
| Sequence | 15 - CAAAGUGCUUACAGUGCAGGUAGU - 38 |
| Evidence |
experimental
Northern [1] |
Mature xtr-miR-17-3p
| Accession | MIMAT0003565 |
| Description | Xenopus tropicalis xtr-miR-17-3p mature miRNA |
| Sequence | 54 - ACUGCAGUGAAGGCACUUGU - 73 |
| Evidence | not_experimental |
References
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