Accession
MI0004815
Description
Xenopus tropicalis
xtr-mir-30c-1 precursor miRNA
Sequence
47279
reads,
5335.0
reads per million, 4 experiments
accaugcagcagugauUGUAAACAUCCUACACUCUCAGCugugaacauaagguggCUGGGAGAAGGGUGUUUACUCccccugccaugga
.(((((..((((.....(((((((((((...(((((((((.............))))))))).))))))))))).....))))))))).
.(((((..((((.....(((((((((((...(((((((((.............))))))))).))))))))))).....))))))))).
Structure
a ca ugauU ACA gugaa ccaug gcag GUAAACAUCCU CUCUCAGCu c ||||| |||| ||||||||||| ||||||||| a gguac cguc CAUUUGUGGGA GAGGGUCgg u a -- cccCU --A uggaa
Annotation confidence
High
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Genome context
2: 87868496-87868584 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-30c-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-miR-30c-5p
| Accession | MIMAT0003577 |
| Description | Xenopus tropicalis xtr-miR-30c-5p mature miRNA |
| Sequence | 17 - UGUAAACAUCCUACACUCUCAGC - 39 |
| Evidence | not_experimental |
Mature xtr-miR-30c-1-3p
| Accession | MIMAT0052092 |
| Description | Xenopus tropicalis xtr-miR-30c-1-3p mature miRNA |
| Sequence | 56 - CUGGGAGAAGGGUGUUUACUC - 76 |
| Evidence | not_experimental |
References
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