Stem-loop xtr-mir-128-2

Accession

MI0004828

Description

Xenopus tropicalis xtr-mir-128-2 precursor miRNA

Sequence

91237 reads, 7309.0 reads per million, 4 experiments

gugcagcuggaaCGGGGGCCGUUACACUGUAAGAgagugaguaguaggucUCACAGUGAACCGGUCUCUUUUcuuacugu
..((((..((((.((((((((...((((((..((((.(........).))))))))))...)))))))).))))..))))

Structure

gu    cu    C        UUA      AA    g gag 
  gcag  ggaa GGGGGCCG   CACUGU  GAga u   u
  ||||  |||| ||||||||   ||||||  |||| |    
  uguc  ucUU UCUCUGGC   GUGACA  CUcu g   a
--    au    U        CAA      --    g aug 

Annotation confidence High

Genome context

6: 65539728-65539807 [+]

Mature xtr-miR-128-2-5p

• Accession: MIMAT0052100
• Description: Xenopus tropicalis xtr-miR-128-2-5p mature miRNA
• Sequence: 13 - CGGGGGCCGUUACACUGUAAGA - 34
• Evidence: experimental ; Northern [1]

Mature xtr-miR-128-3p

• Accession: MIMAT0003589
• Description: Xenopus tropicalis xtr-miR-128-3p mature miRNA
• Sequence: 51 - UCACAGUGAACCGGUCUCUUUU - 72
• Evidence: experimental ; Northern [1]

References

1. PubMed ID: 18032731
   Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
   "Tang GQ, Maxwell ES"
   "Genome Res (2008) 18:104-112