Accession
MI0004831
Description
Xenopus tropicalis
xtr-mir-130a precursor miRNA
Sequence
14070
reads,
1319.0
reads per million, 4 experiments
cuguccaguGCCCUUUUUAUGUUGUACUACuaguggucacacacaaaaaaagCAGUGCAAUGUUAAAAGGGCAUuggccaggg
(((.(((((((((((((.((((((((((.((.(((......)))......)).)))))))))).))))))))))))).)))..
(((.(((((((((((((.((((((((((.((.(((......)))......)).)))))))))).))))))))))))).)))..
Structure
-- u U A -----a gu cug ccaguGCCCUUUU AUGUUGUACU Cu gug c ||| ||||||||||||| |||||||||| || ||| gac gguUACGGGAAAA UGUAACGUGA ga cac a gg c U C aaaaaa ac
Annotation confidence
High
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Genome context
2: 95225186-95225268 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-130a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-miR-130a-5p
| Accession | MIMAT0052104 |
| Description | Xenopus tropicalis xtr-miR-130a-5p mature miRNA |
| Sequence | 10 - GCCCUUUUUAUGUUGUACUAC - 30 |
| Evidence | not_experimental |
Mature xtr-miR-130a-3p
| Accession | MIMAT0003591 |
| Description | Xenopus tropicalis xtr-miR-130a-3p mature miRNA |
| Sequence | 53 - CAGUGCAAUGUUAAAAGGGCAU - 74 |
| Evidence | not_experimental |
References
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