Stem-loop xtr-mir-132

Accession

MI0004834

Description

Xenopus tropicalis xtr-mir-132 precursor miRNA

Literature search

2 open access papers mention xtr-mir-132
(9 sentences)

Sequence

70191 reads, 4703.0 reads per million, 4 experiments

cugucuccagggcaACCGUGGCUUUAGAUUGUUACUguaguucugcauuggUAACAGUCUACAGCCAUGGUCGcucgggcaagaugc
..((((((.((((.(((((((((.(((((((((((((((....)))...)))))))))))).))))))))).)))).))..))))..

Structure

cu    --  a    a         U            ---   g 
  gucu  cc gggc ACCGUGGCU UAGAUUGUUACU   gua u
  ||||  || |||| ||||||||| ||||||||||||   |||  
  uaga  gg cucG UGGUACCGA AUCUGACAAUgg   cgu u
cg    ac  g    C         C            uua   c 

Annotation confidence High

Genome context

2: 35266264-35266350 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-132

Mature xtr-miR-132-5p

• Accession: MIMAT0052107
• Description: Xenopus tropicalis xtr-miR-132-5p mature miRNA
• Sequence: 15 - ACCGUGGCUUUAGAUUGUUACU - 36
• Evidence: not_experimental

Mature xtr-miR-132-3p

• Accession: MIMAT0003594
• Description: Xenopus tropicalis xtr-miR-132-3p mature miRNA
• Sequence: 52 - UAACAGUCUACAGCCAUGGUCG - 73
• Evidence: not_experimental

References