Stem-loop xtr-mir-133b

Accession

MI0004837

Description

Xenopus tropicalis xtr-mir-133b precursor miRNA

Sequence

1200 reads, 129.0 reads per million, 4 experiments

cugcuauggcuggucaaacggaaccaaguccgucuuccuuagagguUUGGUCCCCUUCAACCAGCUAuugcagua
((((.(((((((((..((.((.((((((.((.(((.....))))))))))).)).))..))))))))).))))..

Structure

--    u         ca  c  a      u  g   u 
  cugc auggcuggu  aa gg accaag cc ucu c
  |||| |||||||||  || || |||||| || ||| c
  gacg uAUCGACCA  UU CC UGGUUu gg aga u
au    u         AC  C  C      -  -   u 

Annotation confidence Not enough data

Genome context

5: 150317686-150317760 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-133b

Mature xtr-miR-133b-3p

• Accession: MIMAT0003597
• Description: Xenopus tropicalis xtr-miR-133b-3p mature miRNA
• Sequence: 47 - UUGGUCCCCUUCAACCAGCUA - 67
• Evidence: not_experimental

References