Stem-loop xtr-mir-140

Accession

MI0004841

Description

Xenopus tropicalis xtr-mir-140 precursor miRNA

Sequence

22009 reads, 1678.0 reads per million, 4 experiments

cccucucuguguccucccAGUGGUUUUACCCUAUGGUAGguuacgucaggcuguucUACCACAGGGUAGAACCACGGAcaggauacggggagcu
..(((((((((((((.((.(((((((((((((.(((((((.(((.....).)).))))))).)))))))))))))))..)))))))))))))..

Structure

cc             -c  A             A       u  - g 
  cucucuguguccu  cc GUGGUUUUACCCU UGGUAGg ua c u
  |||||||||||||  || ||||||||||||| ||||||| || | c
  gaggggcauagga  GG CACCAAGAUGGGA ACCAUcu gu g a
uc             cA  -             C       u  c g 

Annotation confidence High

Genome context

4: 60878909-60879002 [-]

Mature xtr-miR-140-5p

• Accession: MIMAT0003601
• Description: Xenopus tropicalis xtr-miR-140-5p mature miRNA
• Sequence: 19 - AGUGGUUUUACCCUAUGGUAG - 39
• Evidence: not_experimental

Mature xtr-miR-140-3p

• Accession: MIMAT0052112
• Description: Xenopus tropicalis xtr-miR-140-3p mature miRNA
• Sequence: 57 - UACCACAGGGUAGAACCACGGA - 78
• Evidence: not_experimental

References