Stem-loop xtr-mir-146a

Accession

MI0004844

Description

Xenopus tropicalis xtr-mir-146a precursor miRNA

Literature search

5 open access papers mention xtr-mir-146a
(23 sentences)

Sequence

2343 reads, 320.0 reads per million, 4 experiments

caaugaguucuuagcuuUGAGAACUGAAUUCCAUAGGUUguuagagguuagaccuauggugcuuaguuccauagcuuggaucccacuggc
((.((.(.(((.((((.((.(((((((...(((((((((...........)))))))))...))))))))).)))).))).).)).))..

Structure

--  a  a u   u    u  A       AUU         guua 
  ca ug g ucu agcu UG GAACUGA   CCAUAGGUU    g
  || || | ||| |||| || |||||||   |||||||||    a
  gu ac c agg ucga ac cuugauu   gguauccag    g
cg  c  c u   u    u  -       cgu         auug 

Annotation confidence Not enough data

Genome context

3: 23242975-23243064 [+]

Mature xtr-miR-146a-5p

• Accession: MIMAT0003604
• Description: Xenopus tropicalis xtr-miR-146a-5p mature miRNA
• Sequence: 18 - UGAGAACUGAAUUCCAUAGGUU - 39
• Evidence: not_experimental

References