Stem-loop xtr-mir-148b

Accession

MI0004845

Description

Xenopus tropicalis xtr-mir-148b precursor miRNA

Literature search

1 open access papers mention xtr-mir-148b
(4 sentences)

Sequence

22438 reads, 2422.0 reads per million, 4 experiments

ugaggaacagcguuugagguGAAGUUCUGUUAUACACUCCGGCUgugaguaaguggaagUCAGUGCAUCACAGAACUUUGUcucgagggcuucacua
..((((..(((.((((((((((((((((((.((.((((..((((.............)))))))).)).)))))))))))))))))).))))).)).

Structure

ug  -  ac   g                  U  A    CC    gugag 
  ag ga  agc uuugagguGAAGUUCUGU AU CACU  GGCU     u
  || ||  ||| |||||||||||||||||| || ||||  ||||     a
  uc cu  ucg gagcucUGUUUCAAGACA UA GUGA  CUga     a
-a  a  --   g                  C  C    --    aggug 

Annotation confidence High

Genome context

2: 145583569-145583665 [-]

Mature xtr-miR-148b-5p

• Accession: MIMAT0052113
• Description: Xenopus tropicalis xtr-miR-148b-5p mature miRNA
• Sequence: 21 - GAAGUUCUGUUAUACACUCCGGCU - 44
• Evidence: not_experimental

Mature xtr-miR-148b-3p

• Accession: MIMAT0003605
• Description: Xenopus tropicalis xtr-miR-148b-3p mature miRNA
• Sequence: 60 - UCAGUGCAUCACAGAACUUUGU - 81
• Evidence: not_experimental

References