Stem-loop xtr-mir-153-1

Accession

MI0004847

Description

Xenopus tropicalis xtr-mir-153-1 precursor miRNA

Literature search

1 open access papers mention xtr-mir-153-1
(4 sentences)

Sequence

6380 reads, 428.0 reads per million, 4 experiments

cacggcugcccuugUCAUUUUUGUGAUUUGCAGCUUguaauuuuggucucagUUGCAUAGUCACAAAAGUGAucaugggcagguggg
..((.((((((.(((((((((((((((((((((((.(..((....))..)))))))).)))))))))))))).)).)))))).))..

Structure

ca  g      u  -              -       U ua  u 
  cg cugccc ug UCAUUUUUGUGAUU UGCAGCU g  au u
  || |||||| || |||||||||||||| ||||||| |  ||  
  gu gacggg ac AGUGAAAACACUGA ACGUUga c  ug u
gg  g      u  u              U       - uc  g 

Annotation confidence High

Genome context

9: 83863796-83863882 [+]

Mature xtr-miR-153-1-5p

• Accession: MIMAT0052115
• Description: Xenopus tropicalis xtr-miR-153-1-5p mature miRNA
• Sequence: 15 - UCAUUUUUGUGAUUUGCAGCUU - 36
• Evidence: not_experimental

Mature xtr-miR-153-3p

• Accession: MIMAT0003607
• Description: Xenopus tropicalis xtr-miR-153-3p mature miRNA
• Sequence: 53 - UUGCAUAGUCACAAAAGUGA - 72
• Evidence: not_experimental

References