Stem-loop xtr-mir-183

Accession

MI0004852

Description

Xenopus tropicalis xtr-mir-183 precursor miRNA

Literature search

1 open access papers mention xtr-mir-183
(1 sentences)

Sequence

4976 reads, 334.0 reads per million, 4 experiments

caucccuccuguucugugUAUGGCACUGGUAGAAUUCACUGugaaaacacaaaaucagugaauuaccauagggccauaaacagagcagagaaagaac
..((..(((((((((((.((((((..(((((..((((((((..............)))))))))))))....)))))).))))))))).))..))..

Structure

ca  cc  -         g      --AC     GA        ugaaaa 
  uc  uc cuguucugu UAUGGC    UGGUA  AUUCACUG      c
  ||  || ||||||||| ||||||    |||||  ||||||||       
  ag  ag gacgagaca auaccg    accau  uaagugac      a
ca  aa  a         a      ggau     --        uaaaac 

Annotation confidence Not enough data

Genome context

3: 87072975-87073071 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from xtr-mir-183

Mature xtr-miR-183-5p

• Accession: MIMAT0003612
• Description: Xenopus tropicalis xtr-miR-183-5p mature miRNA
• Sequence: 19 - UAUGGCACUGGUAGAAUUCACUG - 41
• Evidence: not_experimental

References