Stem-loop xtr-mir-187

Accession

MI0004854

Description

Xenopus tropicalis xtr-mir-187 precursor miRNA

Literature search

1 open access papers mention xtr-mir-187
(1 sentences)

Sequence

3056 reads, 204.0 reads per million, 4 experiments

ugguauaccuuuggUUACAACACAGGACAUGGGAGcuuacuuggaacccUCGUGUCUUGUGUUGCAGCCAgugguggccaaa
((((.((((.((((((.((((((((((((((((..((.....))..)))..))))))))))))).)))))).))))))))..

Structure

--    a    u      A             --   AG  u 
  uggu uacc uuggUU CAACACAGGACAU  GGG  cu a
  |||| |||| |||||| |||||||||||||  |||  || c
  accg gugg gACCGA GUUGUGUUCUGUG  ccc  gg u
aa    -    u      C             CU   aa  u 

Annotation confidence High

Genome context

6: 66809832-66809913 [-]

Mature xtr-miR-187-5p

• Accession: MIMAT0052119
• Description: Xenopus tropicalis xtr-miR-187-5p mature miRNA
• Sequence: 15 - UUACAACACAGGACAUGGGAG - 35
• Evidence: not_experimental

Mature xtr-miR-187-3p

• Accession: MIMAT0003614
• Description: Xenopus tropicalis xtr-miR-187-3p mature miRNA
• Sequence: 50 - UCGUGUCUUGUGUUGCAGCCA - 70
• Evidence: not_experimental

References