Stem-loop xtr-mir-210

Accession

MI0004864

Description

Xenopus tropicalis xtr-mir-210 precursor miRNA

Literature search

4 open access papers mention xtr-mir-210
(13 sentences)

Sequence

5383 reads, 571.0 reads per million, 4 experiments

uccagaugcaggucAGCCACUGACUAACGCACAUUGcgcugcuccuaaaaugccaCUGUGCGUGUGACAGCGGCUAAccagcaucuaggaa
(((((((((.(((.((((.(((.(..(((((((.((.((............)))).)))))))..).))).)))).))).)))))).))).

Structure

-   -      a   c    A   A UA       U  c  ugcuc 
 ucc agaugc ggu AGCC CUG C  ACGCACA UG gc     c
 ||| |||||| ||| |||| ||| |  ||||||| || ||      
 agg ucuacg ccA UCGG GAC G  UGCGUGU ac cg     u
a   a      a   A    C   A UG       C  -  uaaaa 

Annotation confidence High

Genome context

4: 34454532-34454622 [-]

Mature xtr-miR-210-5p

• Accession: MIMAT0052125
• Description: Xenopus tropicalis xtr-miR-210-5p mature miRNA
• Sequence: 15 - AGCCACUGACUAACGCACAUUG - 36
• Evidence: not_experimental

Mature xtr-miR-210-3p

• Accession: MIMAT0003624
• Description: Xenopus tropicalis xtr-miR-210-3p mature miRNA
• Sequence: 56 - CUGUGCGUGUGACAGCGGCUAA - 77
• Evidence: not_experimental

References