Accession
MI0004865
Description
Xenopus tropicalis
xtr-mir-181a-1 precursor miRNA
Sequence
476643
reads,
34809.0
reads per million, 4 experiments
ggcuacuuuagugAACAUUCAACGCUGUCGGUGAGUUugguaucuaaaggcaaACCAUCGAUCGUUGACUGUACAUuacggcaaugccag
(((..((.(((((.(((.((((((..(((((((.(((((.(.......).)))))))))))))))))).))).))))).))....)))..
(((..((.(((((.(((.((((((..(((((((.(((((.(.......).)))))))))))))))))).))).))))).))....)))..
Structure
-- --ua u A U CU A g au ggc cu uagug ACA UCAACG GUCGGUG GUUug u c ||| || ||||| ||| |||||| ||||||| ||||| | u ccg gg auUAC UGU AGUUGC UAGCUAC CAaac g a ga uaac c A C -- - g aa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
4: 111406323-111406412 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-181a-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-miR-181a-5p
| Accession | MIMAT0003625 |
| Description | Xenopus tropicalis xtr-miR-181a-5p mature miRNA |
| Sequence | 14 - AACAUUCAACGCUGUCGGUGAGUU - 37 |
| Evidence |
experimental
Northern [1] |
Mature xtr-miR-181a-1-3p
| Accession | MIMAT0003626 |
| Description | Xenopus tropicalis xtr-miR-181a-1-3p mature miRNA |
| Sequence | 54 - ACCAUCGAUCGUUGACUGUACAU - 76 |
| Evidence | not_experimental |
References
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