Accession
MI0004866
Description
Xenopus tropicalis
xtr-mir-181a-2 precursor miRNA
Sequence
470797
reads,
34360.0
reads per million, 4 experiments
uugagggcuucagagAACAUUCAACGCUGUCGGUGAGUUugagaaaguguaaaaauauaaACCAUCGGCCGUUGACUGUACCcugaggcuuuuca
..(((((((((((.(.(((.((((((..(((((((.(((((................)))))))))))))))))).))).).)))))))))))..
..(((((((((((.(.(((.((((((..(((((((.(((((................)))))))))))))))))).))).).)))))))))))..
Structure
uu a A U CU A agaaagu gagggcuucag g ACA UCAACG GUCGGUG GUUug g ||||||||||| | ||| |||||| ||||||| ||||| uuuucggaguc C UGU AGUUGC CGGCUAC CAaau u ac C A C -- - auaaaaa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
8: 28639922-28640016 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-181a-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-miR-181a-5p
| Accession | MIMAT0003625 |
| Description | Xenopus tropicalis xtr-miR-181a-5p mature miRNA |
| Sequence | 16 - AACAUUCAACGCUGUCGGUGAGUU - 39 |
| Evidence |
experimental
Northern [1] |
Mature xtr-miR-181a-2-3p
| Accession | MIMAT0005461 |
| Description | Xenopus tropicalis xtr-miR-181a-2-3p mature miRNA |
| Sequence | 61 - ACCAUCGGCCGUUGACUGUACC - 82 |
| Evidence | not_experimental |
References
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