Stem-loop xtr-mir-218-1

Accession

MI0004871

Description

Xenopus tropicalis xtr-mir-218-1 precursor miRNA

Sequence

22110 reads, 1780.0 reads per million, 4 experiments

ugguaacaaggcgagauuuucugUUGUGCUUGAUCUAACCAUGUgguugugagguaugaguaAAACAUGGUUCUGUCAAGCACcauggaacgucacgcagcuuucuaca
..(((..((((((.(((.((((((.(((((((((..((((((((.....(.(....).).....))))))))..))))))))).)))))).))).)))..)))..))).

Structure

ug   ac   --   a   u      U         CU        gguug g g 
  gua  aag  gcg gau uucugU GUGCUUGAU  AACCAUGU     u a g
  |||  |||  ||| ||| |||||| |||||||||  ||||||||     | |  
  cau  uuc  cgc cug aaggua CACGAACUG  UUGGUACA     a u u
-a   cu   ga   a   c      c         UC        AAaug g a 

Annotation confidence Medium

Genome context

1: 29787498-29787606 [+]

Mature xtr-miR-218-5p

• Accession: MIMAT0003631
• Description: Xenopus tropicalis xtr-miR-218-5p mature miRNA
• Sequence: 24 - UUGUGCUUGAUCUAACCAUGU - 44
• Evidence: not_experimental

Mature xtr-miR-218-1-3p

• Accession: MIMAT0052129
• Description: Xenopus tropicalis xtr-miR-218-1-3p mature miRNA
• Sequence: 63 - AAACAUGGUUCUGUCAAGCAC - 83
• Evidence: not_experimental

References