Stem-loop xtr-mir-222

Accession

MI0004874

Description

Xenopus tropicalis xtr-mir-222 precursor miRNA

Literature search

1 open access papers mention xtr-mir-222
(1 sentences)

Sequence

26791 reads, 2062.0 reads per million, 4 experiments

CGCUCAGUAAUCAGUGUAGAUCCUGuauaucugucagcAGCUACAUCUGGCUACUGGGUCUCua
.((((((((.(((((((((...(((.........)))...))))).)))).)))))))).....

Structure

----C        A    -     AUC   uau 
     GCUCAGUA UCAG UGUAG   CUG   a
     |||||||| |||| |||||   |||   u
     UGGGUCAU GGUC ACAUC   gac   c
auCUC        C    U     GAc   ugu 

Annotation confidence High

Genome context

2: 55675914-55675977 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-222

Mature xtr-miR-222-5p

• Accession: MIMAT0052132
• Description: Xenopus tropicalis xtr-miR-222-5p mature miRNA
• Sequence: 1 - CGCUCAGUAAUCAGUGUAGAUCCUG - 25
• Evidence: not_experimental

Mature xtr-miR-222-3p

• Accession: MIMAT0003633
• Description: Xenopus tropicalis xtr-miR-222-3p mature miRNA
• Sequence: 39 - AGCUACAUCUGGCUACUGGGUCUC - 62
• Evidence: not_experimental

References