Stem-loop xtr-mir-223

Accession

MI0004875

Description

Xenopus tropicalis xtr-mir-223 precursor miRNA

Literature search

6 open access papers mention xtr-mir-223
(34 sentences)

Sequence

7479 reads, 620.0 reads per million, 4 experiments

aguguggcacugAGUGUAUUUGACAAGCUGAGUCCgacacucaaugagacagagUGUCAGUUUGUCAAAUACCCCaagugaggcac
.((((..((((..(.((((((((((((((......(((((((.........))))))))))))))))))))).)..))))..))))

Structure

a    gg    gA U              GAGUCC       aau 
 gugu  cacu  G GUAUUUGACAAGCU      gacacuc   g
 ||||  ||||  | ||||||||||||||      |||||||   a
 cacg  guga  C CAUAAACUGUUUGA      CUGUgag   g
-    ga    aC C              ------       aca 

Annotation confidence High

Genome context

8: 40495428-40495513 [-]

Mature xtr-miR-223-5p

• Accession: MIMAT0052133
• Description: Xenopus tropicalis xtr-miR-223-5p mature miRNA
• Sequence: 13 - AGUGUAUUUGACAAGCUGAGUCC - 35
• Evidence: not_experimental

Mature xtr-miR-223-3p

• Accession: MIMAT0003634
• Description: Xenopus tropicalis xtr-miR-223-3p mature miRNA
• Sequence: 55 - UGUCAGUUUGUCAAAUACCCC - 75
• Evidence: not_experimental

References