Accession
MI0004876
Description
Xenopus tropicalis
xtr-mir-301-1 precursor miRNA
Sequence
77463
reads,
7164.0
reads per million, 4 experiments
cugcuaauguguGCUCUGACUUUAUUGCACUACUguacuauacagcuagCAGUGCAAUAGUAUUGUCAAAGCaucugcaagcag
(((((..((((((((.((((.((((((((((.((((........)).)).))))))))))....)))).)))))..))))))))
(((((..((((((((.((((.((((((((((.((((........)).)).))))))))))....)))).)))))..))))))))
Structure
aa -- C ---U A - acu
cugcu ugu guGCU UGAC UUAUUGCACU CU gu a
||||| ||| ||||| |||| |||||||||| || ||
gacga acg uaCGA ACUG GAUAACGUGA ga cg u
-- uc A UUAU C u aca
Annotation confidence
High
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Genome context
2: 95225395-95225478 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-301-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-miR-301-1-5p
| Accession | MIMAT0052134 |
| Description | Xenopus tropicalis xtr-miR-301-1-5p mature miRNA |
| Sequence | 13 - GCUCUGACUUUAUUGCACUACU - 34 |
| Evidence | not_experimental |
Mature xtr-miR-301-3p
| Accession | MIMAT0003635 |
| Description | Xenopus tropicalis xtr-miR-301-3p mature miRNA |
| Sequence | 50 - CAGUGCAAUAGUAUUGUCAAAGC - 72 |
| Evidence | not_experimental |
References
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