Stem-loop xtr-mir-489

Accession

MI0004884

Description

Xenopus tropicalis xtr-mir-489 precursor miRNA

Literature search

1 open access papers mention xtr-mir-489
(1 sentences)

Sequence

25374 reads, 1727.0 reads per million, 4 experiments

gugguggcuuagUGGUCGUAUGUAUGACGUCAUUUacuggauuuuuuaggAGUGACAUCAUAUGUACGGCUGCuaaacugcugc
(((((((.(((((((((((((((((((.(((((((.(((((...)))))))))))).))))))))))))))))))).)))))))

Structure

       c                   C       a     u 
guggugg uuagUGGUCGUAUGUAUGA GUCAUUU cugga  
||||||| ||||||||||||||||||| ||||||| ||||| u
cgucguc aauCGUCGGCAUGUAUACU CAGUGAg gauuu  
       a                   A       -     u 

Annotation confidence High

Genome context

6: 32372889-32372972 [-]

Mature xtr-miR-489-5p

• Accession: MIMAT0052139
• Description: Xenopus tropicalis xtr-miR-489-5p mature miRNA
• Sequence: 13 - UGGUCGUAUGUAUGACGUCAUUU - 35
• Evidence: not_experimental

Mature xtr-miR-489-3p

• Accession: MIMAT0003642
• Description: Xenopus tropicalis xtr-miR-489-3p mature miRNA
• Sequence: 51 - AGUGACAUCAUAUGUACGGCUGC - 73
• Evidence: not_experimental

References