Stem-loop xtr-mir-499

Accession

MI0004885

Description

Xenopus tropicalis xtr-mir-499 precursor miRNA

Literature search

3 open access papers mention xtr-mir-499
(9 sentences)

Sequence

47429 reads, 7678.0 reads per million, 4 experiments

gugagagcgaggcagUUAAGACUUGCAGUGAUGUUUAGuuaaaaucuuuucaugAACAUCACUUUAAGUCUGUACUgcuucucccuc
..(((.(.((((((((..(((((((.(((((((((((...............))))))))))).)))))))..)))))))).).)))

Structure

gu   a c        UA       C           Guuaaa 
  gag g gaggcagU  AGACUUG AGUGAUGUUUA      a
  ||| | ||||||||  ||||||| |||||||||||      u
  cuc c cuucgUCA  UCUGAAU UCACUACAAgu      c
--   c u        UG       U           acuuuu 

Annotation confidence High

Genome context

10: 43080541-43080627 [-]

Mature xtr-miR-499-5p

• Accession: MIMAT0003643
• Description: Xenopus tropicalis xtr-miR-499-5p mature miRNA
• Sequence: 16 - UUAAGACUUGCAGUGAUGUUUAG - 38
• Evidence: not_experimental

Mature xtr-miR-499-3p

• Accession: MIMAT0052140
• Description: Xenopus tropicalis xtr-miR-499-3p mature miRNA
• Sequence: 55 - AACAUCACUUUAAGUCUGUACU - 76
• Evidence: not_experimental

References