Stem-loop xtr-mir-1b

Accession

MI0004890

Description

Xenopus tropicalis xtr-mir-1b precursor miRNA

Literature search

1 open access papers mention xtr-mir-1b
(1 sentences)

Sequence

40526 reads, 2936.0 reads per million, 4 experiments

gcacauacuucuuuauaugcccauacugaaugaaaaugcuaUGGAAUGUUAAGAAGUAUGUA
..(((((((((((.((((..((((((...........).))))).)))).))))))))))).

Structure

gc           u    gc     - ugaa 
  acauacuucuu auau  ccaua c    u
  ||||||||||| ||||  ||||| |    g
  UGUAUGAAGAA UGUA  GGUau g    a
-A           U    -A     c uaaa 

Annotation confidence Not enough data

Genome context

2: 82209466-82209527 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-1b

Mature xtr-miR-1b-3p

• Accession: MIMAT0003648
• Description: Xenopus tropicalis xtr-miR-1b-3p mature miRNA
• Sequence: 42 - UGGAAUGUUAAGAAGUAUGUA - 62
• Evidence: not_experimental

References