Accession
MI0004898
Description
Xenopus tropicalis
xtr-mir-30d precursor miRNA
Sequence
104139
reads,
11214.0
reads per million, 4 experiments
aguuugucgcUGUAAACAUCCCCGACUGGAAGcugugaggcugcauuugagCUUUCAGUCUGGUGUUUGCUGCUaccggcu
((((.((.((.(((((((((...((((((((((((((......)))...))))))))))).))))))))).)).)).))))
((((.((.((.(((((((((...((((((((((((((......)))...))))))))))).))))))))).)).)).))))
Structure
u c U CCC --- ag
aguu gu gc GUAAACAUC GACUGGAAGcu gug g
|||| || || ||||||||| ||||||||||| |||
ucgg ca CG CGUUUGUGG CUGACUUUCga uac c
c U U --U guu gu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
6: 144172473-144172553 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-30d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-miR-30d-5p
| Accession | MIMAT0003657 |
| Description | Xenopus tropicalis xtr-miR-30d-5p mature miRNA |
| Sequence | 11 - UGUAAACAUCCCCGACUGGAAG - 32 |
| Evidence | not_experimental |
Mature xtr-miR-30d-3p
| Accession | MIMAT0052147 |
| Description | Xenopus tropicalis xtr-miR-30d-3p mature miRNA |
| Sequence | 52 - CUUUCAGUCUGGUGUUUGCUGCU - 74 |
| Evidence | not_experimental |
References
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