Accession
MI0004909
Description
Xenopus tropicalis
xtr-let-7e-2 precursor miRNA
Sequence
372898
reads,
33964.0
reads per million, 4 experiments
gcccuuuggggUGAGGUAGUAGGUUGUUUAGUUguggguugcacccugacguuuggauaaCUAUACAAUCUACUGUCUUUCcugaaguggcug
(((((((((((.(((((((((((((((.(((((((((((...))))..........))))))).))))))))))))))))))))))).)))..
(((((((((((.(((((((((((((((.(((((((((((...))))..........))))))).))))))))))))))))))))))).)))..
Structure
-- - U U ---------- u gcc cuuugggg GAGGUAGUAGGUUGU UAGUUgu gggu ||| |||||||| ||||||||||||||| ||||||| |||| g cgg gaagucCU UUCUGUCAUCUAACA AUCaaua ccca gu u - U gguuugcagu c
Annotation confidence
High
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Genome context
3: 3748257-3748349 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-let-7e-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-let-7e-5p
| Accession | MIMAT0003666 |
| Description | Xenopus tropicalis xtr-let-7e-5p mature miRNA |
| Sequence | 12 - UGAGGUAGUAGGUUGUUUAGUU - 33 |
| Evidence |
experimental
Northern [1] |
Mature xtr-let-7e-2-3p
| Accession | MIMAT0052155 |
| Description | Xenopus tropicalis xtr-let-7e-2-3p mature miRNA |
| Sequence | 61 - CUAUACAAUCUACUGUCUUUC - 81 |
| Evidence |
experimental
Northern [1] |
References
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