miRBase entry: xtr-mir-16b

Stem-loop xtr-mir-16b


Accession
MI0004910
Description
Xenopus tropicalis xtr-mir-16b precursor miRNA


Sequence

367184 reads, 35863.0 reads per million, 4 experiments
aauugcuccgcauUAGCAGCACGUAAAUAUUGGGUgauaugauauggagccccaguauuauuguacugcuuaaguguggcaagg
..(((((.(((...(((((.(((..((((((((((..(((...)))..).)))))))))..))).)))))...))).)))))..

Structure
aa     c   auU     C   UA         - ga   g 
  uugcu cgc   AGCAG ACG  AAUAUUGGG U  uau  
  ||||| |||   ||||| |||  ||||||||| |  ||| a
  aacgg gug   ucguc ugu  uuaugaccc g  gua  
gg     u   aau     a   ua         c ag   u 


Annotation confidence Not enough data
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Genome context
5: 114788447-114788530 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-16b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-16b-5p

Accession MIMAT0003668
Description Xenopus tropicalis xtr-miR-16b-5p mature miRNA
Sequence 14 - UAGCAGCACGUAAAUAUUGGGU - 35
Evidence not_experimental

References