Accession
MI0004918
Description
Xenopus tropicalis
xtr-mir-29c precursor miRNA
Sequence
84792
reads,
5984.0
reads per million, 4 experiments
ucccuuacacaggaUGACCGAUCUCUCUUGGUGUUCagaggcucaggucuucaucUAGCACCAUUUGAAAUCGGUUAuaauguaagguga
(((((((((....(((((((((.((...(((((((..(((((....))))).....)))))))...)).)))))))))..))))))).))
(((((((((....(((((((((.((...(((((((..(((((....))))).....)))))))...)).)))))))))..))))))).))
Structure
- cagg C UCU ---Ca u uc ccuuaca aUGACCGAU UC UGGUGUU gaggc c || ||||||| ||||||||| || ||||||| ||||| ag ggaaugu uAUUGGCUA AG ACCACGA uucug a u --aa A UUU Ucuac g
Annotation confidence
High
Do you think this miRNA is real?
Genome context
2: 52336921-52337010 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-29c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-miR-29c-5p
| Accession | MIMAT0003676 |
| Description | Xenopus tropicalis xtr-miR-29c-5p mature miRNA |
| Sequence | 15 - UGACCGAUCUCUCUUGGUGUUC - 36 |
| Evidence | not_experimental |
Mature xtr-miR-29c-3p
| Accession | MIMAT0003677 |
| Description | Xenopus tropicalis xtr-miR-29c-3p mature miRNA |
| Sequence | 56 - UAGCACCAUUUGAAAUCGGUUA - 77 |
| Evidence | not_experimental |
References
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