Stem-loop xtr-mir-101a-1

Accession

MI0004928

Description

Xenopus tropicalis xtr-mir-101a-1 precursor miRNA

Sequence

217801 reads, 19090.0 reads per million, 4 experiments

gcgugaacuguccuuuuUCGGUUAUCAUGGUACCGGUGCuguguauaugaaaggUACAGUACUGUGAUAACUGAAGaaugguggugccauc
..(((.((((.((((((((((((((((((((((..(((((............))))).)))))))))))))))))))).))))))..))).

Structure

gc   -a    u  -                    CG     gugua 
  gug  acug cc uuuuUCGGUUAUCAUGGUAC  GUGCu     u
  |||  |||| || ||||||||||||||||||||  |||||      
  uac  uggu gg aaGAAGUCAAUAGUGUCAUG  CAUgg     a
-c   cg    -  u                    -A     aaagu 

Annotation confidence High

Genome context

1: 127269360-127269450 [-]

Mature xtr-miR-101a-1-5p

• Accession: MIMAT0052150
• Description: Xenopus tropicalis xtr-miR-101a-1-5p mature miRNA
• Sequence: 18 - UCGGUUAUCAUGGUACCGGUGC - 39
• Evidence: not_experimental

Mature xtr-miR-101a-3p

• Accession: MIMAT0003662
• Description: Xenopus tropicalis xtr-miR-101a-3p mature miRNA
• Sequence: 55 - UACAGUACUGUGAUAACUGAAG - 76
• Evidence: not_experimental

References