Stem-loop xtr-mir-145

Accession

MI0004939

Description

Xenopus tropicalis xtr-mir-145 precursor miRNA

Literature search

5 open access papers mention xtr-mir-145
(12 sentences)

Sequence

66510 reads, 4712.0 reads per million, 4 experiments

accuauuccucaagGUCCAGUUUUCCCAGGAAUCCCUUgggugcugugguggGGAUUCCUGGAAAUACUGUUCuugggguguaggc
.(((((.((((((((..((((.((.((((((((((((.............)))))))))))).)).)))).)))))))).))))).

Structure

a     u        UC    U  C            Ugggu 
 ccuau ccucaagG  CAGU UU CCAGGAAUCCCU     g
 ||||| ||||||||  |||| || ||||||||||||     c
 ggaug gggguuCU  GUCA AA GGUCCUUAGGgg     u
c     u        -U    U  A            uggug 

Annotation confidence High

Genome context

3: 40375566-40375651 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-145

Mature xtr-miR-145-5p

• Accession: MIMAT0003688
• Description: Xenopus tropicalis xtr-miR-145-5p mature miRNA
• Sequence: 15 - GUCCAGUUUUCCCAGGAAUCCCUU - 38
• Evidence: not_experimental

Mature xtr-miR-145-3p

• Accession: MIMAT0052167
• Description: Xenopus tropicalis xtr-miR-145-3p mature miRNA
• Sequence: 53 - GGAUUCCUGGAAAUACUGUUC - 73
• Evidence: not_experimental

References