Stem-loop xtr-mir-153-2

Accession

MI0004940

Description

Xenopus tropicalis xtr-mir-153-2 precursor miRNA

Literature search

1 open access papers mention xtr-mir-153-2
(10 sentences)

Sequence

8809 reads, 572.0 reads per million, 4 experiments

agcaguugccagugUCAUUUUUGUGACGUUGCAGCUaguaauaugagcccagUUGCAUAGUCACAAAAGUGAuuauuggaaacugu
.((((((.(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).)))))).))))))

Structure

a      g      -             GU       -a  aa 
 gcaguu ccagug UCAUUUUUGUGAC  UGCAGCU  gu  u
 |||||| |||||| |||||||||||||  |||||||  ||  a
 ugucaa gguuau AGUGAAAACACUG  ACGUUga  cg  u
-      a      u             AU       cc  ag 

Annotation confidence High

Genome context

6: 17861069-17861154 [-]

Mature xtr-miR-153-2-5p

• Accession: MIMAT0052116
• Description: Xenopus tropicalis xtr-miR-153-2-5p mature miRNA
• Sequence: 15 - UCAUUUUUGUGACGUUGCAGCU - 36
• Evidence: not_experimental

Mature xtr-miR-153-3p

• Accession: MIMAT0003607
• Description: Xenopus tropicalis xtr-miR-153-3p mature miRNA
• Sequence: 53 - UUGCAUAGUCACAAAAGUGA - 72
• Evidence: not_experimental

References