Stem-loop xtr-mir-196a

Accession

MI0004942

Description

Xenopus tropicalis xtr-mir-196a precursor miRNA

Gene family

MIPF0000031; mir-196

Literature search

1 open access papers mention xtr-mir-196a
(1 sentences)

Sequence

uuuguauccagcugaucugugguuUAGGUAGUUUCAUGUUGUUGGgauugcuuuuucuuaacgcggcaacaagaaacugccuuaauuacgucaguucgucuucauc
.........(((((((..((((((.((((((((((.((((((((.(.(((........)))).)))))))).)))))))))).)))))))))))))..........

Structure

-uuuguaucc       cu      U          A        G a   cuu 
          agcugau  gugguu AGGUAGUUUC UGUUGUUG g uug   u
          |||||||  |||||| |||||||||| |||||||| | |||    
          uugacug  cauuaa uccgucaaag acaacggc c aau   u
cuacuucugc       --      u          a        g -   ucu 

Annotation confidence Not enough data

Genome context

chr2: 142905363-142905468 [-]

Mature xtr-miR-196a

• Accession: MIMAT0003690
• Description: Xenopus tropicalis xtr-miR-196a mature miRNA
• Sequence: 25 - UAGGUAGUUUCAUGUUGUUGG - 45
• Evidence: experimental ; Northern [1]

References

1. PubMed ID: 18032731
   Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
   "Tang GQ, Maxwell ES"
   "Genome Res (2008) 18:104-112