Stem-loop xtr-mir-199b

Accession

MI0004944

Description

Xenopus tropicalis xtr-mir-199b precursor miRNA

Sequence

1015 reads, 108.0 reads per million, 4 experiments

aagaucccgagagguggguggucccguuccCCCAGUGUUCAGACUACGUGUUCguuggacagaaccugaaCAGUAGUCUACACACUGGUUaaacugggccaugcggucaa
..((((((....)).(.(((((((.(((...(((((((..(((((((.((((((..((......)))))))))))))))..)))))))...))).))))))).)))))..

Structure

aa    ccgagaggu g       c   ccC       UC       G      uu  ac 
  gauc         g guggucc guu   CCAGUGU  AGACUAC UGUUCg  gg  a
  ||||         | ||||||| |||   |||||||  ||||||| ||||||  ||   
  cugg         c uaccggg caa   GGUCACA  UCUGAUG ACaagu  cc  g
aa    --------- g       u   aUU       CA       -      --  aa 

Annotation confidence High

Genome context

3: 138803468-138803577 [-]

Mature xtr-miR-199b-5p

• Accession: MIMAT0003692
• Description: Xenopus tropicalis xtr-miR-199b-5p mature miRNA
• Sequence: 31 - CCCAGUGUUCAGACUACGUGUUC - 53
• Evidence: not_experimental

Mature xtr-miR-199b-3p

• Accession: MIMAT0052168
• Description: Xenopus tropicalis xtr-miR-199b-3p mature miRNA
• Sequence: 71 - CAGUAGUCUACACACUGGUU - 90
• Evidence: not_experimental

References