Stem-loop xtr-mir-208

Accession

MI0004951

Description

Xenopus tropicalis xtr-mir-208 precursor miRNA

Literature search

2 open access papers mention xtr-mir-208
(5 sentences)

Sequence

226 reads, 36.0 reads per million, 4 experiments

uccuuucaacaggcAAGCUUUUUGCUUGGAUUAUGUUuucuguuguuguAUAAGACGAGCAUAAAGCUUGUuuguuagaag
..((((.((((((((((((((.((((((..(((((....(....)...)))))..)))))).)))))))))))))).))))

Structure

uc    c              U      GA     UUuu u 
  cuuu aacaggcAAGCUUU UGCUUG  UUAUG    c g
  |||| |||||||||||||| ||||||  |||||    |  
  gaag uuguuUGUUCGAAA ACGAGC  AAUAu    g u
--    a              U      AG     -guu u 

Annotation confidence High

Genome context

1: 139777334-139777414 [-]

Mature xtr-miR-208-5p

• Accession: MIMAT0052173
• Description: Xenopus tropicalis xtr-miR-208-5p mature miRNA
• Sequence: 15 - AAGCUUUUUGCUUGGAUUAUGUU - 37
• Evidence: not_experimental

Mature xtr-miR-208-3p

• Accession: MIMAT0003698
• Description: Xenopus tropicalis xtr-miR-208-3p mature miRNA
• Sequence: 50 - AUAAGACGAGCAUAAAGCUUGU - 71
• Evidence: not_experimental

References