Accession
MI0004959
Description
Xenopus tropicalis
xtr-mir-18b precursor miRNA
Sequence
1133
reads,
185.0
reads per million, 4 experiments
ccuuguguUAAGGUGCAUCUAGUGCAGUUAGugacauaguguagcaucUACUGCCCUAAAUGCUCCUUUUGgcacagg
.((((((((((((.((((.(((.(((((..(((.(........))))..))))).))).)))).)))..)))))))))
.((((((((((((.((((.(((.(((((..(((.(........))))..))))).))).)))).)))..)))))))))
Structure
c -- U C U UA a aua cuuguguUA AGG GCAU UAG GCAGU Gug c g ||||||||| ||| |||| ||| ||||| ||| | ggacacgGU UCC CGUA AUC CGUCA uac g u - UU U A C Uc - aug
Annotation confidence
High
Do you think this miRNA is real?
Genome context
8: 68370500-68370577 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from xtr-mir-18b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-miR-18b-5p
| Accession | MIMAT0003706 |
| Description | Xenopus tropicalis xtr-miR-18b-5p mature miRNA |
| Sequence | 9 - UAAGGUGCAUCUAGUGCAGUUAG - 31 |
| Evidence | not_experimental |
Mature xtr-miR-18b-3p
| Accession | MIMAT0052177 |
| Description | Xenopus tropicalis xtr-miR-18b-3p mature miRNA |
| Sequence | 49 - UACUGCCCUAAAUGCUCCUUUUG - 71 |
| Evidence | not_experimental |
References
|
|
