Stem-loop xtr-mir-19b-1

Accession

MI0004960

Description

Xenopus tropicalis xtr-mir-19b-1 precursor miRNA

Sequence

91808 reads, 11685.0 reads per million, 4 experiments

gcuccugucAGUUUAGCUGGUUUGCAUCAGcugacuauugugcUGUGCAAAUCCAUGCAAAACUGAcuguggc
(((.(.((((((((.(((((((((((.((((..........)))))))))).))).)).)))))))).).)))

Structure

   c u        A  -   -      U    ugac 
gcu c gucAGUUU GC UGG UUUGCA CAGc    u
||| | |||||||| || ||| |||||| ||||     
cgg g cAGUCAAA CG ACC AAACGU GUcg    a
   u u        A  U   U      -    uguu 

Annotation confidence Not enough data

Genome context

8: 68370229-68370301 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from xtr-mir-19b-1

Mature xtr-miR-19b-1-5p

• Accession: MIMAT0052085
• Description: Xenopus tropicalis xtr-miR-19b-1-5p mature miRNA
• Sequence: 10 - AGUUUAGCUGGUUUGCAUCAG - 30
• Evidence: not_experimental

Mature xtr-miR-19b-3p

• Accession: MIMAT0003567
• Description: Xenopus tropicalis xtr-miR-19b-3p mature miRNA
• Sequence: 44 - UGUGCAAAUCCAUGCAAAACUGA - 66
• Evidence: not_experimental

References