Stem-loop xtr-mir-20b

Accession

MI0004961

Description

Xenopus tropicalis xtr-mir-20b precursor miRNA

Literature search

3 open access papers mention xtr-mir-20b
(4 sentences)

Sequence

77953 reads, 11595.0 reads per million, 4 experiments

gcaguucCAAAGUGCUCAUAGUGCAGGUAGuuguauugauguucuacuguaauaugggcacuuacaguacugcu
(((((....(((((((((((.(((((.(((.............)))))))).))))))))))).....))))).

Structure

-     -ucCA           G     G   uugua 
 gcagu     AAGUGCUCAUA UGCAG UAG     u
 |||||     ||||||||||| ||||| |||     u
 cguca     uucacggguau auguc auc     g
u     ugaca           a     -   uugua 

Annotation confidence Not enough data

Genome context

8: 68370342-68370415 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from xtr-mir-20b

Mature xtr-miR-20b-5p

• Accession: MIMAT0003707
• Description: Xenopus tropicalis xtr-miR-20b-5p mature miRNA
• Sequence: 8 - CAAAGUGCUCAUAGUGCAGGUAG - 30
• Evidence: not_experimental

References