Stem-loop mmu-mir-676

Accession

MI0005003

Symbol

MGI: Mir676

Description

Mus musculus mmu-mir-676 precursor miRNA mir-676

Gene
family

RF00966; mir-676

Literature search

7 open access papers mention mmu-mir-676
(14 sentences)

Sequence

56586 reads, 186 reads per million, 94 experiments

cuuugccugaaugcaugACUCUACAACCUUAGGACUUGCagaauuaaaggaaugCCGUCCUGAGGUUGUUGAGCUgugcguuucugggc
....(((((((((((((.(((.(((((((((((((..(((............))).))))))))))))).))).)))))))))..))))

Structure

cuuu    --         A   U             UU   gaauu 
    gccu  gaaugcaug CUC ACAACCUUAGGAC  GCa     a
    ||||  ||||||||| ||| |||||||||||||  |||      
    cggg  uuugcgugU GAG UGUUGGAGUCCUG  Cgu     a
----    uc         C   U             -C   aagga 

Annotation confidence High

Genome context

chrX: 100381097-100381185 [+]

Mature mmu-miR-676-5p

• Accession: MIMAT0003781
• Description: Mus musculus mmu-miR-676-5p mature miRNA
• Sequence: 18 - ACUCUACAACCUUAGGACUUGC - 39
• Evidence: experimental ; MPSS [1], Illumina [3-4]

Mature mmu-miR-676-3p

• Accession: MIMAT0003782
• Description: Mus musculus mmu-miR-676-3p mature miRNA
• Sequence: 55 - CCGUCCUGAGGUUGUUGAGCU - 75
• Evidence: experimental ; MPSS [1], cloned [2], Illumina [3-4]

References

1. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


2. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


3. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771


4. PubMed ID: 16954537
   Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
   "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
   "Genome Res (2006) 16:1289-1298