Stem-loop bta-mir-450a-2

Accession

MI0005048

Description

Bos taurus bta-mir-450a-2 precursor miRNA mir-450

Gene
family

RF00708; mir-450

Literature search

5 open access papers mention bta-mir-450a-2
(7 sentences)

Sequence

3977 reads, 36 reads per million, 67 experiments

caaagaaagaugcuaaacuauUUUUGCGAUGUGUUCCUAAUAUguaaucuaaauguauugggaacauuuugcauucauaguuuuguaucaau
........(((((.(((((((...(((((.(((((((((((((((.......))))))))))))))).)))))...))))))).)))))...

Structure

caaagaaa     u       UUU     U               aa 
        gaugc aaacuau   UGCGA GUGUUCCUAAUAUgu  u
        ||||| |||||||   ||||| |||||||||||||||  c
        cuaug uuugaua   acguu uacaaggguuaugua  u
-----uaa     u       cuu     u               aa 

Annotation confidence Low

Genome context

chrX: 18282193-18282284 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from bta-mir-450a-2

Mature bta-miR-450a

• Accession: MIMAT0003834
• Description: Bos taurus bta-miR-450a mature miRNA
• Sequence: 22 - UUUUGCGAUGUGUUCCUAAUAU - 43
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43